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335 | def check_entries(
entries: list[BibEntry],
client: InspireClient | None = None,
ads_client: AdsClient | None = None,
verbose: bool = False,
batch_size: int = 50,
cache: CheckCache | None = None,
ignore_keys: set[str] | None = None,
) -> list[CheckResult]:
"""Check *entries* against InspireHEP and return one result per entry.
Entries are looked up in batches (OR queries) to minimise the number of
API requests. Already-cached results are reused without hitting the API.
Keys in *ignore_keys* are silently skipped.
For entries that remain ``"missing"`` after the InspireHEP pass, a two-tier
fallback is attempted when the local entry has an ``adsurl`` field:
1. InspireHEP is queried by the ADS bibcode embedded in the ``adsurl``
(``external_system_identifiers.value``). On a hit the status becomes
``"found_via_ads"``.
2. If *ads_client* is provided and tier 1 still finds nothing, the ADS API
is queried directly. On a hit with matching fields the status becomes
``"ok_via_ads"``; with differing fields it becomes ``"mismatch_via_ads"``.
Parameters
----------
entries : list[BibEntry]
Entries to check, typically parsed from a .bib file.
client : InspireClient, optional
InspireHEP API client. A default client is created when ``None``.
ads_client : AdsClient, optional
NASA ADS API client. When ``None`` the ADS direct fallback is skipped.
verbose : bool, optional
Print progress to stdout for each batch. Default is ``False``.
batch_size : int, optional
Number of texkeys to include per API request. Default is 50.
cache : CheckCache, optional
On-disk cache. When provided, cached results are used and new
results are written back to the cache after checking.
ignore_keys : set[str], optional
Citation keys to skip entirely (no API call, no result).
Returns
-------
results : list[CheckResult]
One result per non-ignored input entry.
"""
if client is None:
client = InspireClient()
if ignore_keys is None:
ignore_keys = set()
# Split entries into cache-hits and those that need a network call.
to_fetch: list[BibEntry] = []
cached_results: dict[str, CheckResult] = {}
for entry in entries:
if entry.key in ignore_keys:
continue
if cache is not None:
hit = cache.get(entry.key, entry.fields)
if hit is not None:
cached_results[entry.key] = hit
continue
to_fetch.append(entry)
n_ignored = len(entries) - len(to_fetch) - len(cached_results)
n_cached = len(cached_results)
if verbose and (n_ignored or n_cached):
print(f" {n_cached} from cache, {n_ignored} ignored, {len(to_fetch)} to fetch.")
# Batch-fetch the remaining entries.
records: dict[str, dict[str, Any]] = {}
if to_fetch:
texkeys = [e.key for e in to_fetch]
n_batches = (len(texkeys) + batch_size - 1) // batch_size
if verbose:
print(f"Fetching {len(texkeys)} entries in {n_batches} batch(es) …")
records = client.lookup_by_texkeys(texkeys, batch_size=batch_size)
if verbose:
print(f" {len(records)} found, {len(texkeys) - len(records)} not found.")
# Build results in original entry order (skipping ignored keys).
results: list[CheckResult] = []
for entry in entries:
if entry.key in ignore_keys:
continue
# Use cached result if available.
if entry.key in cached_results:
results.append(cached_results[entry.key])
continue
nonstandard = not bool(_TEXKEY_RE.match(entry.key))
record = records.get(entry.key)
if record is None:
result = CheckResult(
key=entry.key,
status="missing",
nonstandard_key=nonstandard,
local_entry={"key": entry.key, "type": entry.entry_type, **entry.fields},
)
else:
mismatches = _compare_fields(entry, record, client)
result = CheckResult(
key=entry.key,
status="mismatch" if mismatches else "ok",
nonstandard_key=nonstandard,
mismatches=mismatches,
local_entry={"key": entry.key, "type": entry.entry_type, **entry.fields},
inspire_record=record,
)
if cache is not None:
cache.put(entry.key, entry.fields, result)
results.append(result)
# Fallback for "missing" entries that have an adsurl field.
# Tier 1: look up the bibcode on InspireHEP (no extra credentials needed).
# Tier 2: query ADS directly (requires ads_client with a valid token).
for result in results:
if result.status != "missing":
continue
adsurl = (result.local_entry or {}).get("adsurl", "")
bibcode = _extract_ads_bibcode(adsurl)
if not bibcode:
continue
# Tier 1 — InspireHEP via ADS bibcode
if verbose:
print(f" Trying ADS bibcode {bibcode!r} for {result.key!r} …")
inspire_record = client.lookup_by_ads_bibcode(bibcode)
if inspire_record is not None:
temp = _entry_from_result(result)
result.status = "found_via_ads"
result.inspire_record = inspire_record
result.mismatches = _compare_fields(temp, inspire_record, client)
continue
# Tier 2 — ADS directly
if ads_client is None:
continue
if verbose:
print(f" Querying ADS directly for {bibcode!r} …")
ads_doc = ads_client.lookup_by_bibcode(bibcode)
if ads_doc is None:
continue
temp = _entry_from_result(result)
ads_mismatches = _compare_fields_ads(temp, ads_doc)
result.ads_record = ads_doc
result.status = "ok_via_ads" if not ads_mismatches else "mismatch_via_ads"
result.mismatches = ads_mismatches
if cache is not None:
cache.save()
return results
|